Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCN4BQ8IWT1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 RARRES2P8-201ENST00000566335 367 ntBASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 AC027612.4-201ENST00000605371 583 ntBASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN4BQ8IWT1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 AL135744.1-201ENST00000565098 629 ntBASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 MIR4492-201ENST00000581627 80 ntBASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 AC060834.1-201ENST00000443027 2032 ntBASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN4BQ8IWT1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 PCDHB17P-201ENST00000539533 2393 ntBASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 AC092474.2-201ENST00000424288 719 ntBASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.68■□□□□ 0.42
SCN4BQ8IWT1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms