Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 KLF2P3-201ENST00000451977 1087 ntBASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC62Q6P9F0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 AC124947.2-201ENST00000547118 1133 ntBASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC62Q6P9F0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
CCDC62Q6P9F0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 AL035633.1-201ENST00000406139 838 ntBASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 ALG1L8P-201ENST00000533887 760 ntBASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC62Q6P9F0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC62Q6P9F0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms