Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AC079781.3-201ENST00000449110 356 ntBASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AC093909.1-201ENST00000504731 1122 ntBASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AL773604.1-201ENST00000617417 272 ntBASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
HIST2H2AA3Q6FI13 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 FLJ38576-201ENST00000623820 2459 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AL645728.1-201ENST00000366221 2101 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AC084018.2-201ENST00000613093 2607 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 HNRNPDP1-201ENST00000439535 754 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AL160237.2-201ENST00000556165 472 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AC008667.4-201ENST00000607370 168 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 AL031008.1-201ENST00000619963 541 ntBASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST2H2AA3Q6FI13 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.19
HIST2H2AA3Q6FI13 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AC002310.6-201ENST00000624451 1377 ntBASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AC129492.6-201ENST00000611383 1305 ntBASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.26■□□□□ 0.19
HIST2H2AA3Q6FI13 AC013467.2-201ENST00000605472 835 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms