Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RNFT1Q5M7Z0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 TREML5P-201ENST00000421694 576 ntBASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AC142381.1-201ENST00000426099 345 ntBASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 MIR4745-201ENST00000577608 62 ntBASIC15.07■□□□□ 0
RNFT1Q5M7Z0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 MIR6080-201ENST00000617359 66 ntBASIC15.07■□□□□ 0
RNFT1Q5M7Z0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
RNFT1Q5M7Z0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 SPDYE7P-202ENST00000420373 878 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 RNA5SP421-201ENST00000516864 134 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 AC140878.1-201ENST00000565277 250 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 MIR4453-201ENST00000584019 89 ntBASIC15.06■□□□□ 0
RNFT1Q5M7Z0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.06■□□□□ 0
RNFT1Q5M7Z0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms