Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.41■□□□□ 0.22
YBX1P67809 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
YBX1P67809 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
YBX1P67809 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
YBX1P67809 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.4■□□□□ 0.22
YBX1P67809 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.4■□□□□ 0.22
YBX1P67809 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
YBX1P67809 IGLL3P-201ENST00000412472 434 ntBASIC16.4■□□□□ 0.22
YBX1P67809 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.4■□□□□ 0.22
YBX1P67809 KRT18P2-201ENST00000447938 1258 ntBASIC16.4■□□□□ 0.22
YBX1P67809 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.4■□□□□ 0.22
YBX1P67809 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YBX1P67809 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.4■□□□□ 0.22
YBX1P67809 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
YBX1P67809 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
YBX1P67809 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.39■□□□□ 0.21
YBX1P67809 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.39■□□□□ 0.21
YBX1P67809 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
YBX1P67809 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 MIR4751-201ENST00000578027 74 ntBASIC16.39■□□□□ 0.21
YBX1P67809 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 REXO1L3P-201ENST00000622202 1288 ntBASIC16.39■□□□□ 0.21
YBX1P67809 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
YBX1P67809 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
YBX1P67809 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.39■□□□□ 0.21
YBX1P67809 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YBX1P67809 AC007950.2-201ENST00000615045 2347 ntBASIC16.39■□□□□ 0.21
YBX1P67809 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.38■□□□□ 0.21
YBX1P67809 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 AC090340.1-201ENST00000620778 4980 ntBASIC16.38■□□□□ 0.21
YBX1P67809 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.38■□□□□ 0.21
YBX1P67809 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.38■□□□□ 0.21
YBX1P67809 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.38■□□□□ 0.21
YBX1P67809 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.38■□□□□ 0.21
YBX1P67809 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YBX1P67809 MIR574-201ENST00000385209 96 ntBASIC16.38■□□□□ 0.21
YBX1P67809 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.38■□□□□ 0.21
YBX1P67809 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
YBX1P67809 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
YBX1P67809 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.38■□□□□ 0.21
YBX1P67809 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.38■□□□□ 0.21
YBX1P67809 AC107918.2-201ENST00000530817 355 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms