Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MTMR3-206ENST00000415511 604 ntTSL 35.45□□□□□ -1.544e-6■□□□□ 9
NCBP2P52298 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.511e-12■□□□□ 9
NCBP2P52298 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.7■□□□□ 0.421e-12■□□□□ 9
NCBP2P52298 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.65■■□□□ 1.062e-6■□□□□ 9
NCBP2P52298 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.61■□□□□ 0.732e-6■□□□□ 9
NCBP2P52298 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.662e-6■□□□□ 9
NCBP2P52298 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.92■□□□□ 0.622e-6■□□□□ 9
NCBP2P52298 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.62e-6■□□□□ 9
NCBP2P52298 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.582e-6■□□□□ 9
NCBP2P52298 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.08■□□□□ 0.492e-6■□□□□ 9
NCBP2P52298 ACBD4-205ENST00000585553 2241 ntTSL 217.83■□□□□ 0.452e-6■□□□□ 9
NCBP2P52298 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.73■□□□□ 0.432e-6■□□□□ 9
NCBP2P52298 ACBD4-208ENST00000587111 593 ntTSL 415.64■□□□□ 0.092e-6■□□□□ 9
NCBP2P52298 ACBD4-212ENST00000590289 876 ntTSL 311.13□□□□□ -0.632e-6■□□□□ 9
NCBP2P52298 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.974e-11■□□□□ 9
NCBP2P52298 BTRC-206ENST00000475200 527 ntTSL 318.08■□□□□ 0.485e-6■□□□□ 9
NCBP2P52298 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.41□□□□□ -0.265e-6■□□□□ 9
NCBP2P52298 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.325e-6■□□□□ 9
NCBP2P52298 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.275e-6■□□□□ 9
NCBP2P52298 BTRC-205ENST00000465182 685 ntTSL 36.65□□□□□ -1.345e-6■□□□□ 9
NCBP2P52298 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.82□□□□□ -0.041e-6■□□□□ 9
NCBP2P52298 NFIA-210ENST00000479364 1010 ntTSL 511.47□□□□□ -0.571e-6■□□□□ 9
NCBP2P52298 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.44□□□□□ -1.061e-6■□□□□ 9
NCBP2P52298 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC7.49□□□□□ -1.211e-6■□□□□ 9
NCBP2P52298 NFIA-209ENST00000476646 730 ntTSL 34.47□□□□□ -1.691e-6■□□□□ 9
NCBP2P52298 DCXR-217ENST00000582613 617 ntTSL 223.35■■□□□ 1.333e-6■□□□□ 9
NCBP2P52298 NDRG2-276ENST00000557676 633 ntTSL 222.96■■□□□ 1.273e-6■□□□□ 9
NCBP2P52298 NDRG2-245ENST00000555657 578 ntTSL 522.47■■□□□ 1.193e-6■□□□□ 9
NCBP2P52298 C8orf82-205ENST00000534680 1637 ntTSL 522.2■■□□□ 1.143e-6■□□□□ 9
NCBP2P52298 GMPPB-204ENST00000481959 944 ntTSL 322.07■■□□□ 1.123e-6■□□□□ 9
NCBP2P52298 DCXR-220ENST00000585085 927 ntTSL 521.67■■□□□ 1.063e-6■□□□□ 9
NCBP2P52298 NDRG2-247ENST00000555733 924 ntTSL 521.24■□□□□ 0.993e-6■□□□□ 9
NCBP2P52298 NDRG2-254ENST00000556420 671 ntTSL 420.95■□□□□ 0.943e-6■□□□□ 9
NCBP2P52298 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.943e-6■□□□□ 9
NCBP2P52298 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.913e-6■□□□□ 9
NCBP2P52298 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.93e-6■□□□□ 9
NCBP2P52298 KIAA0100-215ENST00000583403 1271 ntTSL 1 (best)20.62■□□□□ 0.893e-6■□□□□ 9
NCBP2P52298 DCXR-221ENST00000585164 475 ntTSL 520.25■□□□□ 0.833e-6■□□□□ 9
NCBP2P52298 DCXR-213ENST00000580320 915 ntTSL 220.19■□□□□ 0.823e-6■□□□□ 9
NCBP2P52298 DCXR-206ENST00000578273 877 ntTSL 520.06■□□□□ 0.83e-6■□□□□ 9
NCBP2P52298 TAB3-201ENST00000288422 805 ntTSL 520.04■□□□□ 0.83e-6■□□□□ 9
NCBP2P52298 ITSN1-220ENST00000451686 501 ntTSL 420.03■□□□□ 0.83e-6■□□□□ 9
NCBP2P52298 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.783e-6■□□□□ 9
NCBP2P52298 NDRG2-241ENST00000555142 609 ntTSL 519.71■□□□□ 0.753e-6■□□□□ 9
NCBP2P52298 DCXR-210ENST00000579334 1251 ntTSL 519.63■□□□□ 0.733e-6■□□□□ 9
NCBP2P52298 MIS18BP1-202ENST00000451174 808 ntTSL 219.59■□□□□ 0.733e-6■□□□□ 9
NCBP2P52298 DCXR-214ENST00000580750 1076 ntTSL 519.4■□□□□ 0.73e-6■□□□□ 9
NCBP2P52298 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.683e-6■□□□□ 9
NCBP2P52298 DCXR-207ENST00000578885 968 ntTSL 519.2■□□□□ 0.663e-6■□□□□ 9
NCBP2P52298 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.643e-6■□□□□ 9
NCBP2P52298 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.623e-6■□□□□ 9
NCBP2P52298 MIS18BP1-204ENST00000454990 2131 ntTSL 218.89■□□□□ 0.613e-6■□□□□ 9
NCBP2P52298 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.63e-6■□□□□ 9
NCBP2P52298 ITSN1-224ENST00000470742 474 ntTSL 418.69■□□□□ 0.583e-6■□□□□ 9
NCBP2P52298 DCXR-218ENST00000582900 676 ntTSL 318.65■□□□□ 0.583e-6■□□□□ 9
NCBP2P52298 ZSCAN2-212ENST00000540936 579 ntTSL 418.62■□□□□ 0.573e-6■□□□□ 9
NCBP2P52298 ZSCAN2-209ENST00000502939 581 ntTSL 418.37■□□□□ 0.533e-6■□□□□ 9
NCBP2P52298 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.523e-6■□□□□ 9
NCBP2P52298 DCXR-215ENST00000581584 766 ntTSL 317.96■□□□□ 0.473e-6■□□□□ 9
NCBP2P52298 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.453e-6■□□□□ 9
NCBP2P52298 GMPPB-205ENST00000495627 711 ntTSL 217.86■□□□□ 0.453e-6■□□□□ 9
NCBP2P52298 ALAD-203ENST00000448137 536 ntTSL 417.77■□□□□ 0.443e-6■□□□□ 9
NCBP2P52298 NDRG2-235ENST00000554489 573 ntTSL 417.51■□□□□ 0.393e-6■□□□□ 9
NCBP2P52298 MTA1-208ENST00000438610 2144 ntTSL 1 (best)17.48■□□□□ 0.393e-6■□□□□ 9
NCBP2P52298 NDRG2-238ENST00000554833 571 ntTSL 417.43■□□□□ 0.383e-6■□□□□ 9
NCBP2P52298 NDRG2-239ENST00000554893 578 ntTSL 417.43■□□□□ 0.383e-6■□□□□ 9
NCBP2P52298 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.29■□□□□ 0.363e-6■□□□□ 9
NCBP2P52298 NDRG2-243ENST00000555384 775 ntTSL 517.26■□□□□ 0.353e-6■□□□□ 9
NCBP2P52298 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.343e-6■□□□□ 9
NCBP2P52298 REEP4-203ENST00000518664 996 ntTSL 217.08■□□□□ 0.323e-6■□□□□ 9
NCBP2P52298 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.323e-6■□□□□ 9
NCBP2P52298 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.323e-6■□□□□ 9
NCBP2P52298 ITSN1-219ENST00000444491 827 ntTSL 417.02■□□□□ 0.323e-6■□□□□ 9
NCBP2P52298 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.88■□□□□ 0.293e-6■□□□□ 9
NCBP2P52298 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.263e-6■□□□□ 9
NCBP2P52298 DCXR-209ENST00000579155 430 ntTSL 516.5■□□□□ 0.233e-6■□□□□ 9
NCBP2P52298 SMG1P3-201ENST00000435197 416 ntTSL 316.44■□□□□ 0.222e-8■□□□□ 9
NCBP2P52298 REEP4-206ENST00000521744 635 ntTSL 316.41■□□□□ 0.223e-6■□□□□ 9
NCBP2P52298 ALAD-209ENST00000494848 547 ntTSL 216.3■□□□□ 0.23e-6■□□□□ 9
NCBP2P52298 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.183e-6■□□□□ 9
NCBP2P52298 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.181e-9■□□□□ 9
NCBP2P52298 NDRG2-252ENST00000556329 609 ntTSL 416.04■□□□□ 0.163e-6■□□□□ 9
NCBP2P52298 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.99■□□□□ 0.155e-6■□□□□ 9
NCBP2P52298 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.75■□□□□ 0.113e-6■□□□□ 9
NCBP2P52298 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.73■□□□□ 0.113e-6■□□□□ 9
NCBP2P52298 MINK1-209ENST00000574453 4941 ntTSL 1 (best)15.71■□□□□ 0.111e-9■□□□□ 9
NCBP2P52298 NDRG2-268ENST00000557274 571 ntTSL 515.47■□□□□ 0.073e-6■□□□□ 9
NCBP2P52298 HIKESHI-202ENST00000528004 1409 ntTSL 215.45■□□□□ 0.063e-6■□□□□ 9
NCBP2P52298 MINK1-207ENST00000572330 5299 ntTSL 515.4■□□□□ 0.061e-9■□□□□ 9
NCBP2P52298 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.39■□□□□ 0.055e-6■□□□□ 9
NCBP2P52298 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.053e-6■□□□□ 9
NCBP2P52298 NDRG2-266ENST00000557198 583 ntTSL 215.38■□□□□ 0.053e-6■□□□□ 9
NCBP2P52298 NDRG2-270ENST00000557318 515 ntTSL 215.38■□□□□ 0.053e-6■□□□□ 9
NCBP2P52298 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.053e-6■□□□□ 9
NCBP2P52298 KIAA0100-205ENST00000577417 1839 ntTSL 1 (best)15.31■□□□□ 0.043e-6■□□□□ 9
NCBP2P52298 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.3■□□□□ 0.043e-6■□□□□ 9
NCBP2P52298 MIS18BP1-208ENST00000494512 531 ntTSL 515.29■□□□□ 0.043e-6■□□□□ 9
NCBP2P52298 EPS8L2-216ENST00000530118 561 ntTSL 315.29■□□□□ 0.043e-6■□□□□ 9
NCBP2P52298 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.27■□□□□ 0.043e-6■□□□□ 9
NCBP2P52298 ALAD-205ENST00000464749 563 ntTSL 415.23■□□□□ 0.033e-6■□□□□ 9
Retrieved 100 of 18,329 protein–RNA pairs in 238.5 ms