Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA4P43681 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA4P43681 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA4P43681 SLC25A1P1-201ENST00000528351 927 ntBASIC16.96■□□□□ 0.31
CHRNA4P43681 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA4P43681 AC091167.2-201ENST00000579581 588 ntBASIC16.96■□□□□ 0.31
CHRNA4P43681 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA4P43681 Z83851.2-201ENST00000609564 659 ntBASIC16.96■□□□□ 0.31
CHRNA4P43681 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA4P43681 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA4P43681 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CHRNA4P43681 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA4P43681 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA4P43681 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA4P43681 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA4P43681 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNA4P43681 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNA4P43681 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA4P43681 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA4P43681 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA4P43681 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA4P43681 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
CHRNA4P43681 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA4P43681 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNA4P43681 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA4P43681 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 AL353732.1-201ENST00000569618 1459 ntBASIC16.95■□□□□ 0.3
CHRNA4P43681 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
CHRNA4P43681 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNA4P43681 PRSS29P-201ENST00000440800 595 ntBASIC16.95■□□□□ 0.3
CHRNA4P43681 VN2R19P-201ENST00000442399 1052 ntBASIC16.95■□□□□ 0.3
CHRNA4P43681 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNA4P43681 AC034105.1-201ENST00000563488 319 ntBASIC16.95■□□□□ 0.3
CHRNA4P43681 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 ALOX12P2-203ENST00000570921 1945 ntBASIC16.95■□□□□ 0.3
CHRNA4P43681 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA4P43681 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA4P43681 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA4P43681 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA4P43681 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNA4P43681 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA4P43681 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 AC006538.1-201ENST00000567905 1585 ntBASIC16.94■□□□□ 0.3
CHRNA4P43681 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA4P43681 AL590627.1-203ENST00000421194 1026 ntBASIC16.94■□□□□ 0.3
CHRNA4P43681 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNA4P43681 FAM185BP-201ENST00000443595 716 ntBASIC16.94■□□□□ 0.3
CHRNA4P43681 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNA4P43681 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNA4P43681 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNA4P43681 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNA4P43681 CYP2A7P1-201ENST00000595391 815 ntBASIC16.94■□□□□ 0.3
CHRNA4P43681 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.94■□□□□ 0.3
CHRNA4P43681 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms