Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.18■□□□□ 0.18
PIK3CBP42338 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.18■□□□□ 0.18
PIK3CBP42338 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.18■□□□□ 0.18
PIK3CBP42338 AC012640.2-201ENST00000561606 901 ntBASIC16.18■□□□□ 0.18
PIK3CBP42338 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 MPDU1-223ENST00000582151 728 ntBASIC16.18■□□□□ 0.18
PIK3CBP42338 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.18■□□□□ 0.18
PIK3CBP42338 AC148477.8-201ENST00000624298 468 ntBASIC16.18■□□□□ 0.18
PIK3CBP42338 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PIK3CBP42338 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
PIK3CBP42338 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIK3CBP42338 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PIK3CBP42338 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.18■□□□□ 0.18
PIK3CBP42338 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PIK3CBP42338 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PIK3CBP42338 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PIK3CBP42338 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 HLA-A-202ENST00000376806 1854 ntBASIC16.17■□□□□ 0.18
PIK3CBP42338 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PIK3CBP42338 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.17■□□□□ 0.18
PIK3CBP42338 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.17■□□□□ 0.18
PIK3CBP42338 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.17■□□□□ 0.18
PIK3CBP42338 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.17■□□□□ 0.18
PIK3CBP42338 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.17■□□□□ 0.18
PIK3CBP42338 MIR4492-201ENST00000581627 80 ntBASIC16.17■□□□□ 0.18
PIK3CBP42338 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PIK3CBP42338 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.17■□□□□ 0.18
PIK3CBP42338 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIK3CBP42338 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
PIK3CBP42338 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.17■□□□□ 0.18
PIK3CBP42338 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.17■□□□□ 0.18
PIK3CBP42338 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 AP002414.3-201ENST00000589352 1468 ntBASIC16.16■□□□□ 0.18
PIK3CBP42338 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.16■□□□□ 0.18
PIK3CBP42338 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.16■□□□□ 0.18
PIK3CBP42338 PCDHA14-201ENST00000506751 2298 ntBASIC16.16■□□□□ 0.18
PIK3CBP42338 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
PIK3CBP42338 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PIK3CBP42338 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 AC107918.2-201ENST00000530817 355 ntBASIC16.16■□□□□ 0.18
PIK3CBP42338 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.16■□□□□ 0.18
PIK3CBP42338 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PIK3CBP42338 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PIK3CBP42338 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.16■□□□□ 0.18
PIK3CBP42338 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PIK3CBP42338 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIK3CBP42338 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms