Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.41■□□□□ 0.54
CLTAP09496 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.41■□□□□ 0.54
CLTAP09496 MTDHP5-201ENST00000598980 586 ntBASIC18.41■□□□□ 0.54
CLTAP09496 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.41■□□□□ 0.54
CLTAP09496 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.41■□□□□ 0.54
CLTAP09496 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLTAP09496 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.41■□□□□ 0.54
CLTAP09496 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLTAP09496 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLTAP09496 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLTAP09496 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLTAP09496 AC022211.2-201ENST00000585075 2527 ntBASIC18.41■□□□□ 0.54
CLTAP09496 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CLTAP09496 KRT8P49-201ENST00000604166 1432 ntBASIC18.4■□□□□ 0.54
CLTAP09496 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLTAP09496 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLTAP09496 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLTAP09496 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.4■□□□□ 0.54
CLTAP09496 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLTAP09496 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.4■□□□□ 0.54
CLTAP09496 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.4■□□□□ 0.54
CLTAP09496 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.4■□□□□ 0.54
CLTAP09496 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.4■□□□□ 0.54
CLTAP09496 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.4■□□□□ 0.54
CLTAP09496 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.4■□□□□ 0.54
CLTAP09496 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.4■□□□□ 0.54
CLTAP09496 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLTAP09496 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLTAP09496 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLTAP09496 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLTAP09496 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CLTAP09496 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLTAP09496 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.39■□□□□ 0.54
CLTAP09496 CICP6-201ENST00000457191 2729 ntBASIC18.39■□□□□ 0.53
CLTAP09496 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLTAP09496 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.39■□□□□ 0.53
CLTAP09496 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
CLTAP09496 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLTAP09496 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.39■□□□□ 0.53
CLTAP09496 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 AC091167.2-201ENST00000579581 588 ntBASIC18.39■□□□□ 0.53
CLTAP09496 AL645728.2-201ENST00000641974 660 ntBASIC18.39■□□□□ 0.53
CLTAP09496 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 AL353732.1-201ENST00000569618 1459 ntBASIC18.39■□□□□ 0.53
CLTAP09496 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLTAP09496 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.39■□□□□ 0.53
CLTAP09496 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLTAP09496 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.38■□□□□ 0.53
CLTAP09496 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.38■□□□□ 0.53
CLTAP09496 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.38■□□□□ 0.53
CLTAP09496 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.38■□□□□ 0.53
CLTAP09496 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms