Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RETP07949 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RETP07949 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RETP07949 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RETP07949 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RETP07949 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
RETP07949 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RETP07949 UXT-AS1-201ENST00000590504 1525 ntBASIC16.96■□□□□ 0.3
RETP07949 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.96■□□□□ 0.3
RETP07949 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.95■□□□□ 0.3
RETP07949 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.95■□□□□ 0.3
RETP07949 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RETP07949 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.95■□□□□ 0.3
RETP07949 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.95■□□□□ 0.3
RETP07949 KRT17P7-201ENST00000451704 1104 ntBASIC16.95■□□□□ 0.3
RETP07949 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.95■□□□□ 0.3
RETP07949 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.95■□□□□ 0.3
RETP07949 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.95■□□□□ 0.3
RETP07949 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
RETP07949 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RETP07949 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
RETP07949 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.94■□□□□ 0.3
RETP07949 AC124067.4-201ENST00000519691 2379 ntBASIC16.94■□□□□ 0.3
RETP07949 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RETP07949 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
RETP07949 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 OR6D1P-202ENST00000641007 5290 ntBASIC16.94■□□□□ 0.3
RETP07949 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
RETP07949 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RETP07949 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
RETP07949 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.94■□□□□ 0.3
RETP07949 ARSEP1-201ENST00000420443 635 ntBASIC16.94■□□□□ 0.3
RETP07949 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 SLC25A6P2-201ENST00000497974 877 ntBASIC16.94■□□□□ 0.3
RETP07949 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.94■□□□□ 0.3
RETP07949 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.94■□□□□ 0.3
RETP07949 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.94■□□□□ 0.3
RETP07949 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RETP07949 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.94■□□□□ 0.3
RETP07949 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
RETP07949 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.94■□□□□ 0.3
RETP07949 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.94■□□□□ 0.3
RETP07949 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RETP07949 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
RETP07949 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RETP07949 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RETP07949 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RETP07949 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RETP07949 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RETP07949 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 AC011270.2-201ENST00000624293 2550 ntBASIC16.93■□□□□ 0.3
RETP07949 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RETP07949 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RETP07949 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 AC084018.2-201ENST00000613093 2607 ntBASIC16.93■□□□□ 0.3
RETP07949 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
RETP07949 AC241585.1-201ENST00000433527 519 ntBASIC16.93■□□□□ 0.3
RETP07949 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.93■□□□□ 0.3
RETP07949 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.93■□□□□ 0.3
RETP07949 LINC01225-203ENST00000563550 1244 ntBASIC16.93■□□□□ 0.3
RETP07949 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.93■□□□□ 0.3
RETP07949 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.93■□□□□ 0.3
RETP07949 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.93■□□□□ 0.3
RETP07949 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.93■□□□□ 0.3
RETP07949 AC084121.4-201ENST00000641598 221 ntBASIC16.93■□□□□ 0.3
RETP07949 AF228730.8-201ENST00000642140 221 ntBASIC16.93■□□□□ 0.3
RETP07949 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
RETP07949 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 CU639417.3-201ENST00000624240 1404 ntBASIC16.93■□□□□ 0.3
RETP07949 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms