Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.65■□□□□ 0.42
RB1P06400 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.65■□□□□ 0.42
RB1P06400 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.65■□□□□ 0.42
RB1P06400 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
RB1P06400 AC012317.2-201ENST00000623305 2251 ntBASIC17.65■□□□□ 0.42
RB1P06400 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.65■□□□□ 0.42
RB1P06400 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.65■□□□□ 0.42
RB1P06400 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.65■□□□□ 0.42
RB1P06400 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.65■□□□□ 0.42
RB1P06400 AC090340.1-201ENST00000620778 4980 ntBASIC17.65■□□□□ 0.42
RB1P06400 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.64■□□□□ 0.42
RB1P06400 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.64■□□□□ 0.42
RB1P06400 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RB1P06400 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RB1P06400 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
RB1P06400 NEFHP1-201ENST00000412845 2629 ntBASIC17.64■□□□□ 0.41
RB1P06400 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.64■□□□□ 0.41
RB1P06400 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
RB1P06400 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 GNAQP1-201ENST00000444815 1067 ntBASIC17.64■□□□□ 0.41
RB1P06400 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.64■□□□□ 0.41
RB1P06400 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 RNA5SP410-201ENST00000516285 106 ntBASIC17.64■□□□□ 0.41
RB1P06400 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
RB1P06400 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RB1P06400 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.64■□□□□ 0.41
RB1P06400 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.64■□□□□ 0.41
RB1P06400 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RB1P06400 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RB1P06400 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RB1P06400 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RB1P06400 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.64■□□□□ 0.41
RB1P06400 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.63■□□□□ 0.41
RB1P06400 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 RPS2P32-201ENST00000439199 892 ntBASIC17.63■□□□□ 0.41
RB1P06400 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 ACA64.2-201ENST00000459014 129 ntBASIC17.63■□□□□ 0.41
RB1P06400 RN7SL618P-201ENST00000477850 296 ntBASIC17.63■□□□□ 0.41
RB1P06400 DOC2GP-202ENST00000514950 1163 ntBASIC17.63■□□□□ 0.41
RB1P06400 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.63■□□□□ 0.41
RB1P06400 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RB1P06400 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RB1P06400 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.63■□□□□ 0.41
RB1P06400 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.63■□□□□ 0.41
RB1P06400 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.63■□□□□ 0.41
RB1P06400 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RB1P06400 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RB1P06400 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.63■□□□□ 0.41
RB1P06400 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RB1P06400 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RB1P06400 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RB1P06400 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.62■□□□□ 0.41
RB1P06400 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RB1P06400 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
RB1P06400 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RB1P06400 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms