Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.2■□□□□ 0.34
MT-ND3P03897 AP002490.2-201ENST00000524791 560 ntBASIC17.2■□□□□ 0.34
MT-ND3P03897 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
MT-ND3P03897 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.2■□□□□ 0.34
MT-ND3P03897 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.2■□□□□ 0.34
MT-ND3P03897 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 HLA-A-202ENST00000376806 1854 ntBASIC17.2■□□□□ 0.34
MT-ND3P03897 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 AC092364.2-201ENST00000596710 2692 ntBASIC17.2■□□□□ 0.34
MT-ND3P03897 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
MT-ND3P03897 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.19■□□□□ 0.34
MT-ND3P03897 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.19■□□□□ 0.34
MT-ND3P03897 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MT-ND3P03897 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MT-ND3P03897 AC079781.3-201ENST00000449110 356 ntBASIC17.19■□□□□ 0.34
MT-ND3P03897 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.19■□□□□ 0.34
MT-ND3P03897 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MT-ND3P03897 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.19■□□□□ 0.34
MT-ND3P03897 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.19■□□□□ 0.34
MT-ND3P03897 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MT-ND3P03897 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MT-ND3P03897 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-ND3P03897 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 FAM220CP-201ENST00000395253 831 ntBASIC17.18■□□□□ 0.34
MT-ND3P03897 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 AC106795.1-205ENST00000512851 1056 ntBASIC17.18■□□□□ 0.34
MT-ND3P03897 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 AP002469.2-201ENST00000531724 424 ntBASIC17.18■□□□□ 0.34
MT-ND3P03897 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 REXO1L6P-202ENST00000619970 1078 ntBASIC17.18■□□□□ 0.34
MT-ND3P03897 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND3P03897 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND3P03897 AL391256.1-201ENST00000443260 1855 ntBASIC17.18■□□□□ 0.34
MT-ND3P03897 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
MT-ND3P03897 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms