Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
APOC1P02654 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC1P02654 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
APOC1P02654 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC1P02654 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.94□□□□□ -0.02
APOC1P02654 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.94□□□□□ -0.02
APOC1P02654 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.94□□□□□ -0.02
APOC1P02654 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.94□□□□□ -0.02
APOC1P02654 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC1P02654 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC1P02654 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 AP005117.1-201ENST00000584346 1413 ntBASIC14.93□□□□□ -0.02
APOC1P02654 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.93□□□□□ -0.02
APOC1P02654 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 RBM17P3-201ENST00000417687 1192 ntBASIC14.93□□□□□ -0.02
APOC1P02654 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.93□□□□□ -0.02
APOC1P02654 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 NUS1P1-201ENST00000446295 882 ntBASIC14.93□□□□□ -0.02
APOC1P02654 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.93□□□□□ -0.02
APOC1P02654 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 AC092068.3-201ENST00000587894 2016 ntBASIC14.93□□□□□ -0.02
APOC1P02654 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC1P02654 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.93□□□□□ -0.02
APOC1P02654 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
APOC1P02654 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 HYMAI-201ENST00000635591 3347 ntBASIC14.92□□□□□ -0.02
APOC1P02654 AC148477.5-201ENST00000625164 1645 ntBASIC14.92□□□□□ -0.02
APOC1P02654 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.92□□□□□ -0.02
APOC1P02654 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOC1P02654 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOC1P02654 LINC00982-205ENST00000420957 435 ntBASIC14.92□□□□□ -0.02
APOC1P02654 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.92□□□□□ -0.02
APOC1P02654 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms