Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 PCDHA14-201ENST00000506751 2298 ntBASIC15.98■□□□□ 0.15
LRIT2A6NDA9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 AL591424.1-201ENST00000442569 1213 ntBASIC15.98■□□□□ 0.15
LRIT2A6NDA9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 AC027601.4-201ENST00000611259 610 ntBASIC15.98■□□□□ 0.15
LRIT2A6NDA9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 AL645728.2-201ENST00000641974 660 ntBASIC15.98■□□□□ 0.15
LRIT2A6NDA9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.98■□□□□ 0.15
LRIT2A6NDA9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 HMGA1P7-201ENST00000406908 502 ntBASIC15.97■□□□□ 0.15
LRIT2A6NDA9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.97■□□□□ 0.15
LRIT2A6NDA9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 AL031432.2-201ENST00000566714 459 ntBASIC15.97■□□□□ 0.15
LRIT2A6NDA9 AL928711.1-201ENST00000570165 459 ntBASIC15.97■□□□□ 0.15
LRIT2A6NDA9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 FAM197Y3-203ENST00000618346 717 ntBASIC15.97■□□□□ 0.15
LRIT2A6NDA9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRIT2A6NDA9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 AL022342.1-201ENST00000400363 863 ntBASIC15.96■□□□□ 0.15
LRIT2A6NDA9 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 MED15P5-201ENST00000423150 992 ntBASIC15.96■□□□□ 0.15
LRIT2A6NDA9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.96■□□□□ 0.15
LRIT2A6NDA9 AC018845.2-201ENST00000568326 409 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms