Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 AL671277.1-201ENST00000429656 993 ntBASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 SLC25A6P2-201ENST00000497974 877 ntBASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 AC239800.4-201ENST00000603712 296 ntBASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 CICP6-201ENST00000457191 2729 ntBASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 AC018695.7-201ENST00000624587 2492 ntBASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA9Q9Y5G4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 SPDYE11-202ENST00000450699 704 ntBASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 AC093520.2-201ENST00000561830 333 ntBASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 SPDYE9P-201ENST00000570642 692 ntBASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 SPDYE10P-202ENST00000612005 668 ntBASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 SPDYE8P-202ENST00000612377 668 ntBASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 AJ011932.1-201ENST00000621707 465 ntBASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA9Q9Y5G4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 AC005237.2-201ENST00000434368 219 ntBASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CNN2P2-201ENST00000443536 909 ntBASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CNN2P3-201ENST00000450201 906 ntBASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 MIR4745-201ENST00000577608 62 ntBASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 AC099522.2-201ENST00000607001 744 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms