Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 WASH6P-202ENST00000359512 1437 ntBASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTDP1Q9Y5B0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 FRMD8P1-201ENST00000440433 1524 ntBASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 SLC22A20-204ENST00000530038 1673 ntBASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 RNU1-129P-201ENST00000384064 167 ntBASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 U1.21-201ENST00000580816 167 ntBASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTDP1Q9Y5B0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 SLC25A1P3-201ENST00000395415 828 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 SPCS2P4-201ENST00000436160 681 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 RBPMS2P1-201ENST00000437762 623 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 CNN2P2-201ENST00000443536 909 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 CNN2P3-201ENST00000450201 906 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 AC069335.1-201ENST00000489972 472 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 AL136317.3-201ENST00000618497 906 ntBASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTDP1Q9Y5B0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTDP1Q9Y5B0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.39■□□□□ 0.7
CTDP1Q9Y5B0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTDP1Q9Y5B0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.39■□□□□ 0.7
CTDP1Q9Y5B0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTDP1Q9Y5B0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 KRT8P23-201ENST00000560090 1207 ntBASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 Z92544.3-201ENST00000624747 417 ntBASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTDP1Q9Y5B0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms