Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX4Q9UIU6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX4Q9UIU6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX4Q9UIU6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC211486.1-202ENST00000416371 468 ntBASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC211476.1-201ENST00000503899 468 ntBASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC020916.1-201ENST00000587762 1774 ntBASIC17.93■□□□□ 0.46
SIX4Q9UIU6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC092171.3-201ENST00000610122 2651 ntBASIC17.93■□□□□ 0.46
SIX4Q9UIU6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX4Q9UIU6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AL671277.1-201ENST00000429656 993 ntBASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AC004967.1-201ENST00000453589 447 ntBASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AC021097.1-201ENST00000607902 574 ntBASIC17.92■□□□□ 0.46
SIX4Q9UIU6 GPALPP1-207ENST00000611650 899 ntBASIC17.92■□□□□ 0.46
SIX4Q9UIU6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AC016027.1-202ENST00000607927 1699 ntBASIC17.92■□□□□ 0.46
SIX4Q9UIU6 AL031731.1-201ENST00000642131 2094 ntBASIC17.92■□□□□ 0.46
SIX4Q9UIU6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SIX4Q9UIU6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 AP006288.1-201ENST00000446065 395 ntBASIC17.91■□□□□ 0.46
SIX4Q9UIU6 HLA-J-202ENST00000469281 1241 ntBASIC17.91■□□□□ 0.46
SIX4Q9UIU6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 KRT8P48-201ENST00000515599 1220 ntBASIC17.91■□□□□ 0.46
SIX4Q9UIU6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX4Q9UIU6 RARRES2P8-201ENST00000566335 367 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms