Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC6Q9UBN7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HDAC6Q9UBN7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
HDAC6Q9UBN7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HDAC6Q9UBN7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 ADH5P3-201ENST00000433842 1137 ntBASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 AGGF1P2-201ENST00000426656 2106 ntBASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC6Q9UBN7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 HLA-J-203ENST00000494367 1087 ntBASIC19■□□□□ 0.63
HDAC6Q9UBN7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 AC109322.1-201ENST00000524499 1264 ntBASIC19■□□□□ 0.63
HDAC6Q9UBN7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 PCDHB19P-201ENST00000570871 2371 ntBASIC19■□□□□ 0.63
HDAC6Q9UBN7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms