Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.15■□□□□ 0.34
RTP4Q96DX8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 AC148477.8-201ENST00000624298 468 ntBASIC17.15■□□□□ 0.34
RTP4Q96DX8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTP4Q96DX8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 OR7E14P-202ENST00000530490 1290 ntBASIC17.14■□□□□ 0.33
RTP4Q96DX8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 AC008667.4-201ENST00000607370 168 ntBASIC17.14■□□□□ 0.33
RTP4Q96DX8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 AC129492.6-201ENST00000611383 1305 ntBASIC17.14■□□□□ 0.33
RTP4Q96DX8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTP4Q96DX8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.14■□□□□ 0.33
RTP4Q96DX8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 RPS2P1-201ENST00000434010 821 ntBASIC17.13■□□□□ 0.33
RTP4Q96DX8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 IGHV3-65-201ENST00000523210 341 ntBASIC17.13■□□□□ 0.33
RTP4Q96DX8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 AC005412.3-201ENST00000580309 715 ntBASIC17.13■□□□□ 0.33
RTP4Q96DX8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 GPALPP1-207ENST00000611650 899 ntBASIC17.13■□□□□ 0.33
RTP4Q96DX8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTP4Q96DX8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms