Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 PI4KAP1-204ENST00000612579 1703 ntBASIC15.55■□□□□ 0.08
CNOT9Q92600 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 AC073648.2-201ENST00000510116 352 ntBASIC15.55■□□□□ 0.08
CNOT9Q92600 OR7E14P-202ENST00000530490 1290 ntBASIC15.55■□□□□ 0.08
CNOT9Q92600 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.55■□□□□ 0.08
CNOT9Q92600 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.55■□□□□ 0.08
CNOT9Q92600 AC006557.2-201ENST00000592985 1240 ntBASIC15.55■□□□□ 0.08
CNOT9Q92600 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.55■□□□□ 0.08
CNOT9Q92600 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 PCDH8P1-201ENST00000428983 2773 ntBASIC15.55■□□□□ 0.08
CNOT9Q92600 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.55■□□□□ 0.08
CNOT9Q92600 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT9Q92600 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT9Q92600 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 HLA-A-202ENST00000376806 1854 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CNOT9Q92600 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.54■□□□□ 0.08
CNOT9Q92600 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 PCDHB19P-201ENST00000570871 2371 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CNOT9Q92600 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 FAM197Y8-203ENST00000450145 560 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 AC087163.2-201ENST00000457299 853 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT9Q92600 AL121912.1-201ENST00000603683 238 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CNOT9Q92600 AL805961.1-202ENST00000641562 540 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT9Q92600 LINC00895-201ENST00000629028 1637 ntBASIC15.54■□□□□ 0.08
CNOT9Q92600 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CNOT9Q92600 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT9Q92600 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT9Q92600 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms