Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 HCG4-201ENST00000418983 998 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 PMS2P1-201ENST00000431037 1228 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 AC007967.2-201ENST00000432613 625 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 MPDU1-223ENST00000582151 728 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 AC140113.2-201ENST00000604370 208 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 ACTL9-202ENST00000612068 1252 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 AP001350.2-201ENST00000625104 1094 ntBASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC12Q8WUD4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 RHOQP3-201ENST00000437982 621 ntBASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 KRT18P3-201ENST00000451602 1288 ntBASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 AC010507.1-201ENST00000633895 436 ntBASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 AC007064.4-201ENST00000637740 555 ntBASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 PCDHB17P-201ENST00000539533 2393 ntBASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 LINC00895-201ENST00000629028 1637 ntBASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC12Q8WUD4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 AC105020.1-201ENST00000435356 2205 ntBASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 AC013467.2-201ENST00000605472 835 ntBASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 AC131009.4-201ENST00000624048 1740 ntBASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC12Q8WUD4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 MIR574-201ENST00000385209 96 ntBASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms