Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 UBALD1-205ENST00000590891 2641 ntBASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 AL645728.1-201ENST00000366221 2101 ntBASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP1Q8TDR0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 AL391256.1-201ENST00000443260 1855 ntBASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 AC092171.3-201ENST00000610122 2651 ntBASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 KRT8P49-201ENST00000604166 1432 ntBASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
TRAF3IP1Q8TDR0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP1Q8TDR0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 AF238378.1-201ENST00000526806 358 ntBASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 DUX4L17-201ENST00000557360 1267 ntBASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 AC004706.3-202ENST00000621574 984 ntBASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP1Q8TDR0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP1Q8TDR0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms