Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 AC091167.2-201ENST00000579581 588 ntBASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 MPDU1-223ENST00000582151 728 ntBASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 REXO1L3P-201ENST00000622202 1288 ntBASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDKL3Q8IVW4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 KRT18P56-201ENST00000507275 550 ntBASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 OR7E14P-202ENST00000530490 1290 ntBASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CDKL3Q8IVW4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 AC006449.5-201ENST00000610658 2098 ntBASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 RPS15P9-201ENST00000494093 319 ntBASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 SLC25A6P2-201ENST00000497974 877 ntBASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms