Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 SPDYE17-201ENST00000412399 783 ntBASIC20.84■□□□□ 0.93
COL23A1Q86Y22 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 USP32P1-208ENST00000506594 1164 ntBASIC20.84■□□□□ 0.93
COL23A1Q86Y22 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL23A1Q86Y22 AC093525.9-201ENST00000624961 1746 ntBASIC20.84■□□□□ 0.93
COL23A1Q86Y22 AC020907.1-201ENST00000616460 1350 ntBASIC20.84■□□□□ 0.93
COL23A1Q86Y22 NOC2LP1-202ENST00000452600 2235 ntBASIC20.84■□□□□ 0.93
COL23A1Q86Y22 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.83■□□□□ 0.93
COL23A1Q86Y22 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 AC010319.3-201ENST00000597028 470 ntBASIC20.83■□□□□ 0.93
COL23A1Q86Y22 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.83■□□□□ 0.93
COL23A1Q86Y22 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL23A1Q86Y22 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.83■□□□□ 0.92
COL23A1Q86Y22 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
COL23A1Q86Y22 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL23A1Q86Y22 AC090164.3-201ENST00000610780 2143 ntBASIC20.83■□□□□ 0.92
COL23A1Q86Y22 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.83■□□□□ 0.92
COL23A1Q86Y22 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
COL23A1Q86Y22 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.82■□□□□ 0.92
COL23A1Q86Y22 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AC093503.3-201ENST00000624917 2352 ntBASIC20.82■□□□□ 0.92
COL23A1Q86Y22 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AC098818.2-201ENST00000564925 2320 ntBASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AL671710.1-201ENST00000610245 2349 ntBASIC20.82■□□□□ 0.92
COL23A1Q86Y22 AC108860.2-201ENST00000562760 2183 ntBASIC20.82■□□□□ 0.92
COL23A1Q86Y22 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL23A1Q86Y22 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 AC133963.1-201ENST00000504166 1679 ntBASIC20.81■□□□□ 0.92
COL23A1Q86Y22 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms