Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHD1LQ86WJ1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD1LQ86WJ1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.79■□□□□ 0.92
CHD1LQ86WJ1 KRT8P39-201ENST00000396270 1433 ntBASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AL031731.1-201ENST00000642131 2094 ntBASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 GGTLC5P-201ENST00000617623 998 ntBASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD1LQ86WJ1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 IGHV3-65-201ENST00000523210 341 ntBASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 AL691432.3-201ENST00000621860 400 ntBASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 AC148477.8-201ENST00000624298 468 ntBASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 GGT4P-201ENST00000623672 1708 ntBASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD1LQ86WJ1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.77■□□□□ 0.91
CHD1LQ86WJ1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHD1LQ86WJ1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CHD1LQ86WJ1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHD1LQ86WJ1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHD1LQ86WJ1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHD1LQ86WJ1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 AP002414.3-201ENST00000589352 1468 ntBASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 CYP2A7P1-201ENST00000595391 815 ntBASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 AL356488.2-201ENST00000602755 427 ntBASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms