Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.39■□□□□ 0.22
LYSMD4Q5XG99 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 AC073439.1-201ENST00000624121 1774 ntBASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 RNA5SP410-201ENST00000516285 106 ntBASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 AC004840.1-201ENST00000636359 365 ntBASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD4Q5XG99 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 AP006294.1-201ENST00000415407 339 ntBASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 DFFBP1-201ENST00000433250 979 ntBASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 GIMAP3P-201ENST00000495150 836 ntBASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 AC098859.1-201ENST00000502915 1238 ntBASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD4Q5XG99 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AC087289.5-201ENST00000586076 3175 ntBASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 BTBD7P1-201ENST00000447253 1453 ntBASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 AC087499.6-201ENST00000411576 835 ntBASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD4Q5XG99 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms