Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
GABREP78334 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GABREP78334 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.97■□□□□ 0.15
GABREP78334 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.97■□□□□ 0.15
GABREP78334 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.97■□□□□ 0.15
GABREP78334 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.97■□□□□ 0.15
GABREP78334 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.97■□□□□ 0.15
GABREP78334 AL590560.3-201ENST00000623350 461 ntBASIC15.97■□□□□ 0.15
GABREP78334 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.97■□□□□ 0.15
GABREP78334 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GABREP78334 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.97■□□□□ 0.15
GABREP78334 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GABREP78334 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 LYSMD4-203ENST00000378904 2122 ntBASIC15.97■□□□□ 0.15
GABREP78334 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GABREP78334 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.97■□□□□ 0.15
GABREP78334 AC134043.2-201ENST00000624206 2238 ntBASIC15.96■□□□□ 0.15
GABREP78334 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GABREP78334 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.96■□□□□ 0.15
GABREP78334 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.96■□□□□ 0.15
GABREP78334 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.96■□□□□ 0.15
GABREP78334 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
GABREP78334 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.96■□□□□ 0.15
GABREP78334 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.96■□□□□ 0.15
GABREP78334 COX5BP8-201ENST00000416911 349 ntBASIC15.96■□□□□ 0.15
GABREP78334 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.96■□□□□ 0.15
GABREP78334 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.96■□□□□ 0.15
GABREP78334 KRT17P7-201ENST00000451704 1104 ntBASIC15.96■□□□□ 0.15
GABREP78334 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.96■□□□□ 0.15
GABREP78334 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
GABREP78334 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.96■□□□□ 0.15
GABREP78334 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
GABREP78334 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GABREP78334 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
GABREP78334 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
GABREP78334 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
GABREP78334 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GABREP78334 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
GABREP78334 AC022144.1-201ENST00000602255 1580 ntBASIC15.96■□□□□ 0.14
GABREP78334 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.96■□□□□ 0.14
GABREP78334 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.95■□□□□ 0.14
GABREP78334 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 MIR3909-201ENST00000579518 119 ntBASIC15.95■□□□□ 0.14
GABREP78334 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.95■□□□□ 0.14
GABREP78334 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.95■□□□□ 0.14
GABREP78334 AC003101.2-201ENST00000612557 442 ntBASIC15.95■□□□□ 0.14
GABREP78334 AP001350.2-201ENST00000625104 1094 ntBASIC15.95■□□□□ 0.14
GABREP78334 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GABREP78334 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
GABREP78334 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
GABREP78334 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GABREP78334 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GABREP78334 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GABREP78334 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms