Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H2BCP62807 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H2BCP62807 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H2BCP62807 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 AP003680.1-201ENST00000598970 3660 ntBASIC12.68□□□□□ -0.38
HIST1H2BCP62807 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 AL023284.2-201ENST00000405850 579 ntBASIC12.68□□□□□ -0.38
HIST1H2BCP62807 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 AC002310.6-201ENST00000624451 1377 ntBASIC12.68□□□□□ -0.38
HIST1H2BCP62807 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H2BCP62807 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 EDA-201ENST00000338901 1233 ntBASIC12.67□□□□□ -0.38
HIST1H2BCP62807 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 AL121829.2-201ENST00000620908 328 ntBASIC12.67□□□□□ -0.38
HIST1H2BCP62807 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 LINC00167-201ENST00000530583 1419 ntBASIC12.67□□□□□ -0.38
HIST1H2BCP62807 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 EGFEM1P-202ENST00000431685 1563 ntBASIC12.67□□□□□ -0.38
HIST1H2BCP62807 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HIST1H2BCP62807 AC027601.5-201ENST00000624065 2482 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms