Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
HCFC1P51610 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.58□□□□□ -0.08
HCFC1P51610 AL132655.2-201ENST00000596276 594 ntBASIC14.58□□□□□ -0.08
HCFC1P51610 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.58□□□□□ -0.08
HCFC1P51610 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 CU639417.3-201ENST00000624240 1404 ntBASIC14.58□□□□□ -0.08
HCFC1P51610 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.58□□□□□ -0.08
HCFC1P51610 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.58□□□□□ -0.08
HCFC1P51610 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.58□□□□□ -0.08
HCFC1P51610 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
HCFC1P51610 CR383656.12-201ENST00000549567 513 ntBASIC14.58□□□□□ -0.08
HCFC1P51610 MIR4492-201ENST00000581627 80 ntBASIC14.58□□□□□ -0.08
HCFC1P51610 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCFC1P51610 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.58□□□□□ -0.08
HCFC1P51610 AC106820.2-201ENST00000563775 3264 ntBASIC14.58□□□□□ -0.08
HCFC1P51610 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.57□□□□□ -0.08
HCFC1P51610 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.57□□□□□ -0.08
HCFC1P51610 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.57□□□□□ -0.08
HCFC1P51610 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.57□□□□□ -0.08
HCFC1P51610 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.57□□□□□ -0.08
HCFC1P51610 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.57□□□□□ -0.08
HCFC1P51610 PRYP6-201ENST00000514804 343 ntBASIC14.57□□□□□ -0.08
HCFC1P51610 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.57□□□□□ -0.08
HCFC1P51610 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 AL662799.1-202ENST00000614205 422 ntBASIC14.57□□□□□ -0.08
HCFC1P51610 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.57□□□□□ -0.08
HCFC1P51610 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.57□□□□□ -0.08
HCFC1P51610 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.57□□□□□ -0.08
HCFC1P51610 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 AC133963.1-201ENST00000504166 1679 ntBASIC14.57□□□□□ -0.08
HCFC1P51610 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCFC1P51610 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.56□□□□□ -0.08
HCFC1P51610 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 HLA-V-201ENST00000429037 534 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.56□□□□□ -0.08
HCFC1P51610 SPDYE12P-201ENST00000618416 771 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
HCFC1P51610 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms