Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD40LGP29965 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD40LGP29965 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
CD40LGP29965 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD40LGP29965 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD40LGP29965 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD40LGP29965 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
CD40LGP29965 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD40LGP29965 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD40LGP29965 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD40LGP29965 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.98□□□□□ -0.01
CD40LGP29965 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 B3GAT3P1-201ENST00000471720 806 ntBASIC14.98□□□□□ -0.01
CD40LGP29965 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.98□□□□□ -0.01
CD40LGP29965 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.98□□□□□ -0.01
CD40LGP29965 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 AC130371.2-201ENST00000619443 611 ntBASIC14.98□□□□□ -0.01
CD40LGP29965 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40LGP29965 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40LGP29965 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CD40LGP29965 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40LGP29965 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 AC005089.1-201ENST00000619486 2241 ntBASIC14.97□□□□□ -0.01
CD40LGP29965 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CD40LGP29965 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CD40LGP29965 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CD40LGP29965 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 AC007292.2-201ENST00000593524 1812 ntBASIC14.97□□□□□ -0.01
CD40LGP29965 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CD40LGP29965 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.97□□□□□ -0.01
CD40LGP29965 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40LGP29965 AC116562.2-201ENST00000507042 360 ntBASIC14.97□□□□□ -0.01
CD40LGP29965 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.97□□□□□ -0.01
CD40LGP29965 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40LGP29965 SLC25A1P4-201ENST00000567977 778 ntBASIC14.97□□□□□ -0.01
CD40LGP29965 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.97□□□□□ -0.01
CD40LGP29965 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40LGP29965 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD40LGP29965 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CD40LGP29965 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40LGP29965 EGFEM1P-202ENST00000431685 1563 ntBASIC14.97□□□□□ -0.01
CD40LGP29965 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms