Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FREM3P0C091 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FREM3P0C091 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.27■□□□□ 0.03
FREM3P0C091 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FREM3P0C091 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.27■□□□□ 0.03
FREM3P0C091 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM3P0C091 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
FREM3P0C091 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.26■□□□□ 0.03
FREM3P0C091 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.26■□□□□ 0.03
FREM3P0C091 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 AC022145.2-201ENST00000598203 171 ntBASIC15.26■□□□□ 0.03
FREM3P0C091 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.26■□□□□ 0.03
FREM3P0C091 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.26■□□□□ 0.03
FREM3P0C091 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.26■□□□□ 0.03
FREM3P0C091 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.26■□□□□ 0.03
FREM3P0C091 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 AC004461.1-201ENST00000412461 403 ntBASIC15.26■□□□□ 0.03
FREM3P0C091 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.26■□□□□ 0.03
FREM3P0C091 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.26■□□□□ 0.03
FREM3P0C091 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.26■□□□□ 0.03
FREM3P0C091 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.26■□□□□ 0.03
FREM3P0C091 MIR4492-201ENST00000581627 80 ntBASIC15.26■□□□□ 0.03
FREM3P0C091 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM3P0C091 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FREM3P0C091 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM3P0C091 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 PCDHB19P-201ENST00000570871 2371 ntBASIC15.25■□□□□ 0.03
FREM3P0C091 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FREM3P0C091 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
FREM3P0C091 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FREM3P0C091 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM3P0C091 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 MIR4515-201ENST00000584082 81 ntBASIC15.25■□□□□ 0.03
FREM3P0C091 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM3P0C091 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM3P0C091 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 AC092171.3-201ENST00000610122 2651 ntBASIC15.25■□□□□ 0.03
FREM3P0C091 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM3P0C091 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 WASH6P-202ENST00000359512 1437 ntBASIC15.25■□□□□ 0.03
FREM3P0C091 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM3P0C091 AP006288.1-201ENST00000446065 395 ntBASIC15.25■□□□□ 0.03
FREM3P0C091 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM3P0C091 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
FREM3P0C091 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM3P0C091 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM3P0C091 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM3P0C091 PCDHB17P-201ENST00000539533 2393 ntBASIC15.25■□□□□ 0.03
FREM3P0C091 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FREM3P0C091 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FREM3P0C091 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FREM3P0C091 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM3P0C091 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM3P0C091 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms