Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
PDGFAP04085 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFAP04085 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFAP04085 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFAP04085 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PDGFAP04085 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PDGFAP04085 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFAP04085 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 AC092850.2-201ENST00000623821 2697 ntBASIC15.79■□□□□ 0.12
PDGFAP04085 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 AL627223.1-201ENST00000416693 442 ntBASIC15.79■□□□□ 0.12
PDGFAP04085 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 SLC25A6P2-201ENST00000497974 877 ntBASIC15.79■□□□□ 0.12
PDGFAP04085 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.79■□□□□ 0.12
PDGFAP04085 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFAP04085 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
PDGFAP04085 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PDGFAP04085 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.79■□□□□ 0.12
PDGFAP04085 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFAP04085 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFAP04085 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFAP04085 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFAP04085 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.78■□□□□ 0.12
PDGFAP04085 KRT8P48-201ENST00000515599 1220 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 AC112191.1-201ENST00000523689 701 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 AC069262.1-201ENST00000539058 672 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 AC099522.2-201ENST00000607001 744 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 AC009093.7-201ENST00000623853 1223 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 Z92544.3-201ENST00000624747 417 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFAP04085 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFAP04085 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFAP04085 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.78■□□□□ 0.12
PDGFAP04085 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms