Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TOP3BO95985 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 COX5BP2-201ENST00000392354 334 ntBASIC17.29■□□□□ 0.36
TOP3BO95985 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.29■□□□□ 0.36
TOP3BO95985 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.29■□□□□ 0.36
TOP3BO95985 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.29■□□□□ 0.36
TOP3BO95985 AL096865.1-201ENST00000606796 927 ntBASIC17.29■□□□□ 0.36
TOP3BO95985 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.29■□□□□ 0.36
TOP3BO95985 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TOP3BO95985 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TOP3BO95985 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
TOP3BO95985 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP3BO95985 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP3BO95985 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TOP3BO95985 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TOP3BO95985 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TOP3BO95985 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
TOP3BO95985 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
TOP3BO95985 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.28■□□□□ 0.36
TOP3BO95985 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.28■□□□□ 0.36
TOP3BO95985 AC092474.2-201ENST00000424288 719 ntBASIC17.28■□□□□ 0.36
TOP3BO95985 AC007967.3-201ENST00000434308 558 ntBASIC17.28■□□□□ 0.36
TOP3BO95985 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.28■□□□□ 0.36
TOP3BO95985 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.28■□□□□ 0.36
TOP3BO95985 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.28■□□□□ 0.36
TOP3BO95985 AC108751.1-201ENST00000490852 363 ntBASIC17.28■□□□□ 0.36
TOP3BO95985 AC138761.1-201ENST00000584393 385 ntBASIC17.28■□□□□ 0.36
TOP3BO95985 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.28■□□□□ 0.36
TOP3BO95985 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
TOP3BO95985 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.28■□□□□ 0.36
TOP3BO95985 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP3BO95985 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.27■□□□□ 0.36
TOP3BO95985 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.27■□□□□ 0.36
TOP3BO95985 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.27■□□□□ 0.36
TOP3BO95985 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.27■□□□□ 0.36
TOP3BO95985 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP3BO95985 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP3BO95985 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 LAGE3P1-201ENST00000425356 484 ntBASIC17.27■□□□□ 0.36
TOP3BO95985 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP3BO95985 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.27■□□□□ 0.36
TOP3BO95985 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP3BO95985 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.27■□□□□ 0.36
TOP3BO95985 BX005266.1-201ENST00000473402 457 ntBASIC17.27■□□□□ 0.36
TOP3BO95985 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.27■□□□□ 0.36
TOP3BO95985 AC018845.2-201ENST00000568326 409 ntBASIC17.27■□□□□ 0.36
TOP3BO95985 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms