Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
GPC4O75487 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
GPC4O75487 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC4O75487 AC079781.3-201ENST00000449110 356 ntBASIC16.94■□□□□ 0.3
GPC4O75487 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.94■□□□□ 0.3
GPC4O75487 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.94■□□□□ 0.3
GPC4O75487 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC4O75487 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GPC4O75487 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC4O75487 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GPC4O75487 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
GPC4O75487 AC104692.2-201ENST00000603054 253 ntBASIC16.94■□□□□ 0.3
GPC4O75487 AL589182.2-201ENST00000619332 1049 ntBASIC16.94■□□□□ 0.3
GPC4O75487 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC4O75487 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 NCF1C-201ENST00000438382 1427 ntBASIC16.94■□□□□ 0.3
GPC4O75487 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GPC4O75487 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC4O75487 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC4O75487 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.93■□□□□ 0.3
GPC4O75487 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GPC4O75487 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC4O75487 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC4O75487 AL353135.1-201ENST00000606729 504 ntBASIC16.93■□□□□ 0.3
GPC4O75487 AL031008.1-201ENST00000619963 541 ntBASIC16.93■□□□□ 0.3
GPC4O75487 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GPC4O75487 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC4O75487 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC4O75487 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.92■□□□□ 0.3
GPC4O75487 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GPC4O75487 AC079328.2-201ENST00000561241 3354 ntBASIC16.92■□□□□ 0.3
GPC4O75487 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.92■□□□□ 0.3
GPC4O75487 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
GPC4O75487 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.92■□□□□ 0.3
GPC4O75487 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.92■□□□□ 0.3
GPC4O75487 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 EGFEM1P-202ENST00000431685 1563 ntBASIC16.92■□□□□ 0.3
GPC4O75487 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms