Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 AC004832.2-201ENST00000426397 482 ntBASIC17.64■□□□□ 0.41
OPHN1O60890 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 UNC93B6-202ENST00000528242 690 ntBASIC17.64■□□□□ 0.41
OPHN1O60890 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.64■□□□□ 0.41
OPHN1O60890 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.64■□□□□ 0.41
OPHN1O60890 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
OPHN1O60890 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.64■□□□□ 0.41
OPHN1O60890 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.64■□□□□ 0.41
OPHN1O60890 CICP6-201ENST00000457191 2729 ntBASIC17.64■□□□□ 0.41
OPHN1O60890 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.64■□□□□ 0.41
OPHN1O60890 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.64■□□□□ 0.41
OPHN1O60890 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.64■□□□□ 0.41
OPHN1O60890 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
OPHN1O60890 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.63■□□□□ 0.41
OPHN1O60890 SPDYE21P-201ENST00000413323 827 ntBASIC17.63■□□□□ 0.41
OPHN1O60890 AL020989.1-201ENST00000422979 469 ntBASIC17.63■□□□□ 0.41
OPHN1O60890 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 SIGLEC30P-201ENST00000455569 941 ntBASIC17.63■□□□□ 0.41
OPHN1O60890 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.63■□□□□ 0.41
OPHN1O60890 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.63■□□□□ 0.41
OPHN1O60890 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
OPHN1O60890 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.63■□□□□ 0.41
OPHN1O60890 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.63■□□□□ 0.41
OPHN1O60890 MTDHP4-201ENST00000600287 670 ntBASIC17.63■□□□□ 0.41
OPHN1O60890 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.63■□□□□ 0.41
OPHN1O60890 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
OPHN1O60890 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.63■□□□□ 0.41
OPHN1O60890 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
OPHN1O60890 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
OPHN1O60890 AL118508.1-201ENST00000613502 2345 ntBASIC17.63■□□□□ 0.41
OPHN1O60890 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.62■□□□□ 0.41
OPHN1O60890 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
OPHN1O60890 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 AC007967.2-201ENST00000432613 625 ntBASIC17.62■□□□□ 0.41
OPHN1O60890 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
OPHN1O60890 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.62■□□□□ 0.41
OPHN1O60890 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 MTDHP5-201ENST00000598980 586 ntBASIC17.62■□□□□ 0.41
OPHN1O60890 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.62■□□□□ 0.41
OPHN1O60890 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
OPHN1O60890 AC107918.4-202ENST00000641623 219 ntBASIC17.62■□□□□ 0.41
OPHN1O60890 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
OPHN1O60890 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
OPHN1O60890 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.62■□□□□ 0.41
OPHN1O60890 AC106886.4-201ENST00000623557 2502 ntBASIC17.62■□□□□ 0.41
OPHN1O60890 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
OPHN1O60890 SIGLEC16-201ENST00000599858 1437 ntBASIC17.62■□□□□ 0.41
OPHN1O60890 GPR89P-201ENST00000407924 1495 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms