Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.89■□□□□ 0.94
RGPD3A6NKT7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RGPD3A6NKT7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RGPD3A6NKT7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 LINC01115-203ENST00000606068 577 ntBASIC20.89■□□□□ 0.93
RGPD3A6NKT7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RGPD3A6NKT7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 RN7SL399P-201ENST00000471648 279 ntBASIC20.88■□□□□ 0.93
RGPD3A6NKT7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RGPD3A6NKT7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC007969.1-201ENST00000433675 447 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 HIST3H2BA-201ENST00000436555 524 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 EEF1DP4-201ENST00000446006 880 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC106760.1-201ENST00000508690 800 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 ACTG1P17-201ENST00000558391 1119 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC133539.2-201ENST00000604757 467 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC244669.2-201ENST00000612320 853 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC093525.9-201ENST00000624961 1746 ntBASIC20.87■□□□□ 0.93
RGPD3A6NKT7 AC133963.1-201ENST00000504166 1679 ntBASIC20.86■□□□□ 0.93
RGPD3A6NKT7 AC116353.5-201ENST00000638148 1699 ntBASIC20.86■□□□□ 0.93
RGPD3A6NKT7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms