Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 WASH4P-201ENST00000564273 1246 ntBASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 AC106886.1-201ENST00000568660 600 ntBASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 AC004790.1-201ENST00000612686 536 ntBASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 MIR6805-201ENST00000615055 62 ntBASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.05■□□□□ 0.96
RTCBQ9Y3I0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 AC112492.5-201ENST00000421897 457 ntBASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 KRT17P8-201ENST00000540749 863 ntBASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTCBQ9Y3I0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 AL512361.1-201ENST00000554200 418 ntBASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 AL023806.1-201ENST00000603994 1649 ntBASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTCBQ9Y3I0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 RAB43P1-201ENST00000561790 589 ntBASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AC007431.3-201ENST00000623221 587 ntBASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.02■□□□□ 0.96
RTCBQ9Y3I0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms