Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCDNQ9UBB6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 AC009477.1-201ENST00000452936 217 ntBASIC16.67■□□□□ 0.26
NCDNQ9UBB6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 AC007967.4-201ENST00000614700 386 ntBASIC16.67■□□□□ 0.26
NCDNQ9UBB6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.67■□□□□ 0.26
NCDNQ9UBB6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 DFFBP1-201ENST00000433250 979 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AC092552.1-201ENST00000547243 906 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 RARRES2P9-201ENST00000565168 469 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.66■□□□□ 0.26
NCDNQ9UBB6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCDNQ9UBB6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 AL391825.1-201ENST00000457671 1364 ntBASIC16.65■□□□□ 0.26
NCDNQ9UBB6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCDNQ9UBB6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms