Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 AL390719.2-201ENST00000606993 987 ntBASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 AC073578.4-201ENST00000623945 514 ntBASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 AC026691.1-201ENST00000602502 2017 ntBASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD4L1Q9NU39 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
FOXD4L1Q9NU39 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
FOXD4L1Q9NU39 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 HBZP1-201ENST00000354915 429 ntBASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 SNORA40.4-201ENST00000390971 128 ntBASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 TSPY26P-202ENST00000565928 3884 ntBASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 AL022393.1-201ENST00000625142 1677 ntBASIC20.45■□□□□ 0.86
FOXD4L1Q9NU39 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 AL035563.1-201ENST00000609087 1539 ntBASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 TRIM60P13-201ENST00000432350 1283 ntBASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 AC112907.2-201ENST00000448639 330 ntBASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 AL031432.5-201ENST00000641059 760 ntBASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD4L1Q9NU39 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 MTCO1P15-201ENST00000529569 1526 ntBASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FOXD4L1Q9NU39 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms