Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AC006557.2-201ENST00000592985 1240 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 AL139424.1-201ENST00000607572 797 ntBASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
NECTIN3Q9NQS3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 AL603756.1-201ENST00000606511 2163 ntBASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 ELK2BP-201ENST00000415014 1224 ntBASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NECTIN3Q9NQS3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 AL590627.1-203ENST00000421194 1026 ntBASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NECTIN3Q9NQS3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.18
NECTIN3Q9NQS3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NECTIN3Q9NQS3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.21■□□□□ 0.18
NECTIN3Q9NQS3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NECTIN3Q9NQS3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms