Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 FO538757.1-201ENST00000623083 1397 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC107890.1-201ENST00000422478 521 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC140658.5-201ENST00000438532 169 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC007274.1-201ENST00000439805 662 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 FAM207CP-201ENST00000443486 507 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC002558.1-201ENST00000488906 803 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 SLC25A6P2-201ENST00000497974 877 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AC008761.3-201ENST00000624803 892 ntBASIC19.72■□□□□ 0.75
TRIM47Q96LD4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM47Q96LD4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 LINC00304-203ENST00000565008 1864 ntBASIC19.71■□□□□ 0.75
TRIM47Q96LD4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 AP005018.1-201ENST00000525475 301 ntBASIC19.71■□□□□ 0.75
TRIM47Q96LD4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 AC012313.1-201ENST00000593393 3059 ntBASIC19.71■□□□□ 0.75
TRIM47Q96LD4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM47Q96LD4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 RN7SL589P-201ENST00000481268 310 ntBASIC19.7■□□□□ 0.74
TRIM47Q96LD4 AC125807.1-201ENST00000483097 614 ntBASIC19.7■□□□□ 0.74
TRIM47Q96LD4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM47Q96LD4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms