Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALPK3Q96L96 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALPK3Q96L96 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ALPK3Q96L96 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 FXNP2-201ENST00000411625 547 ntBASIC18.06■□□□□ 0.48
ALPK3Q96L96 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 AC006033.1-201ENST00000440505 426 ntBASIC18.06■□□□□ 0.48
ALPK3Q96L96 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 FTH1P14-201ENST00000482930 551 ntBASIC18.06■□□□□ 0.48
ALPK3Q96L96 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.06■□□□□ 0.48
ALPK3Q96L96 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 AC007551.1-201ENST00000457394 519 ntBASIC18.06■□□□□ 0.48
ALPK3Q96L96 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ALPK3Q96L96 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.06■□□□□ 0.48
ALPK3Q96L96 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 KRT43P-201ENST00000434019 910 ntBASIC18.05■□□□□ 0.48
ALPK3Q96L96 AL162726.2-201ENST00000438986 1017 ntBASIC18.05■□□□□ 0.48
ALPK3Q96L96 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALPK3Q96L96 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.05■□□□□ 0.48
ALPK3Q96L96 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 KRT8P49-201ENST00000604166 1432 ntBASIC18.04■□□□□ 0.48
ALPK3Q96L96 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALPK3Q96L96 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.04■□□□□ 0.48
ALPK3Q96L96 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 MEP1AP4-201ENST00000423244 1087 ntBASIC18.03■□□□□ 0.48
ALPK3Q96L96 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.03■□□□□ 0.48
ALPK3Q96L96 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALPK3Q96L96 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms