Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 POLD2P1-201ENST00000511220 997 ntBASIC17.29■□□□□ 0.36
CCDC97Q96F63 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.29■□□□□ 0.36
CCDC97Q96F63 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC97Q96F63 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC97Q96F63 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 RBM17P3-201ENST00000417687 1192 ntBASIC17.28■□□□□ 0.36
CCDC97Q96F63 BX005266.1-201ENST00000473402 457 ntBASIC17.28■□□□□ 0.36
CCDC97Q96F63 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC97Q96F63 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC97Q96F63 AC009336.1-201ENST00000608941 1553 ntBASIC17.28■□□□□ 0.36
CCDC97Q96F63 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 CICP6-201ENST00000457191 2729 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 AC046185.3-201ENST00000623228 1824 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 KLF4P1-201ENST00000412782 1185 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 SPDYE21P-201ENST00000413323 827 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 AC018712.1-201ENST00000455767 687 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 FGFR3P6-201ENST00000457012 610 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 IGHV3-52-201ENST00000519770 353 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 SART3-203ENST00000546611 1184 ntBASIC17.27■□□□□ 0.36
CCDC97Q96F63 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC97Q96F63 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC97Q96F63 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms