Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
AP3S1Q92572 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.92□□□□□ -0.02
AP3S1Q92572 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.92□□□□□ -0.02
AP3S1Q92572 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
AP3S1Q92572 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.92□□□□□ -0.02
AP3S1Q92572 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.91□□□□□ -0.02
AP3S1Q92572 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
AP3S1Q92572 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.91□□□□□ -0.02
AP3S1Q92572 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.91□□□□□ -0.02
AP3S1Q92572 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.91□□□□□ -0.02
AP3S1Q92572 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.91□□□□□ -0.02
AP3S1Q92572 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 AC116562.4-202ENST00000641738 218 ntBASIC14.91□□□□□ -0.02
AP3S1Q92572 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.91□□□□□ -0.02
AP3S1Q92572 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP3S1Q92572 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S1Q92572 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S1Q92572 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
AP3S1Q92572 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 AC002310.6-201ENST00000624451 1377 ntBASIC14.9□□□□□ -0.02
AP3S1Q92572 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP3S1Q92572 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 AL355802.2-201ENST00000402069 882 ntBASIC14.9□□□□□ -0.02
AP3S1Q92572 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S1Q92572 C1QBPP2-201ENST00000528754 825 ntBASIC14.9□□□□□ -0.02
AP3S1Q92572 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.9□□□□□ -0.02
AP3S1Q92572 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.9□□□□□ -0.02
AP3S1Q92572 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S1Q92572 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.9□□□□□ -0.02
AP3S1Q92572 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.9□□□□□ -0.02
AP3S1Q92572 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.9□□□□□ -0.02
AP3S1Q92572 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP3S1Q92572 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP3S1Q92572 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP3S1Q92572 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP3S1Q92572 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms