Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 NME2P1-201ENST00000426182 414 ntBASIC17.91■□□□□ 0.46
RNF135Q8IUD6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 STK19B-204ENST00000512515 211 ntBASIC17.91■□□□□ 0.46
RNF135Q8IUD6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 AL355312.1-201ENST00000407115 2176 ntBASIC17.91■□□□□ 0.46
RNF135Q8IUD6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 BX276092.7-203ENST00000637198 1536 ntBASIC17.9■□□□□ 0.46
RNF135Q8IUD6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 AC079140.1-201ENST00000508039 487 ntBASIC17.9■□□□□ 0.46
RNF135Q8IUD6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 AC099522.2-201ENST00000607001 744 ntBASIC17.9■□□□□ 0.46
RNF135Q8IUD6 AC019129.2-201ENST00000609837 1235 ntBASIC17.9■□□□□ 0.46
RNF135Q8IUD6 AC025048.6-201ENST00000634326 1161 ntBASIC17.9■□□□□ 0.46
RNF135Q8IUD6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF135Q8IUD6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RNF135Q8IUD6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 AL596325.1-201ENST00000563991 1082 ntBASIC17.89■□□□□ 0.45
RNF135Q8IUD6 AC109462.3-201ENST00000573934 613 ntBASIC17.89■□□□□ 0.45
RNF135Q8IUD6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF135Q8IUD6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms