Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 AC254562.1-201ENST00000417586 456 ntBASIC19.98■□□□□ 0.79
CTR9Q6PD62 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.98■□□□□ 0.79
CTR9Q6PD62 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 CYP2A7P1-201ENST00000595391 815 ntBASIC19.98■□□□□ 0.79
CTR9Q6PD62 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 AC079781.4-201ENST00000641908 219 ntBASIC19.98■□□□□ 0.79
CTR9Q6PD62 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.98■□□□□ 0.79
CTR9Q6PD62 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTR9Q6PD62 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 RNU1-129P-201ENST00000384064 167 ntBASIC19.97■□□□□ 0.79
CTR9Q6PD62 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 AC092474.2-201ENST00000424288 719 ntBASIC19.97■□□□□ 0.79
CTR9Q6PD62 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 U1.21-201ENST00000580816 167 ntBASIC19.97■□□□□ 0.79
CTR9Q6PD62 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 AC105339.1-204ENST00000636249 355 ntBASIC19.97■□□□□ 0.79
CTR9Q6PD62 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CTR9Q6PD62 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTR9Q6PD62 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 AL355306.1-201ENST00000415580 579 ntBASIC19.96■□□□□ 0.79
CTR9Q6PD62 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.96■□□□□ 0.79
CTR9Q6PD62 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTR9Q6PD62 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.79
CTR9Q6PD62 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 AL671277.1-201ENST00000429656 993 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms