Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AF228730.7-201ENST00000641842 219 ntBASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF549Q6P9A3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 AC079328.2-201ENST00000561241 3354 ntBASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 RPS15P9-201ENST00000494093 319 ntBASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 SNX33P1-201ENST00000592116 1762 ntBASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF549Q6P9A3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 RN7SL510P-201ENST00000581311 263 ntBASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF549Q6P9A3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ZNF549Q6P9A3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms