Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNA1Q09470 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNA1Q09470 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.52■□□□□ 0.55
KCNA1Q09470 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.52■□□□□ 0.55
KCNA1Q09470 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA1Q09470 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA1Q09470 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 HLA-A-202ENST00000376806 1854 ntBASIC18.51■□□□□ 0.55
KCNA1Q09470 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA1Q09470 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KCNA1Q09470 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KCNA1Q09470 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA1Q09470 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA1Q09470 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA1Q09470 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA1Q09470 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNA1Q09470 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNA1Q09470 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KCNA1Q09470 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.5■□□□□ 0.55
KCNA1Q09470 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNA1Q09470 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNA1Q09470 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 AC140113.2-201ENST00000604370 208 ntBASIC18.5■□□□□ 0.55
KCNA1Q09470 AC013467.2-201ENST00000605472 835 ntBASIC18.5■□□□□ 0.55
KCNA1Q09470 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 ZNF259P1-201ENST00000407656 1365 ntBASIC18.5■□□□□ 0.55
KCNA1Q09470 AL353732.1-201ENST00000569618 1459 ntBASIC18.5■□□□□ 0.55
KCNA1Q09470 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA1Q09470 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA1Q09470 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
KCNA1Q09470 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNA1Q09470 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 MIR574-201ENST00000385209 96 ntBASIC18.49■□□□□ 0.55
KCNA1Q09470 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 RHOQP3-201ENST00000437982 621 ntBASIC18.49■□□□□ 0.55
KCNA1Q09470 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.49■□□□□ 0.55
KCNA1Q09470 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms