Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RAE1P78406 AF186996.4-201ENST00000467186 377 ntBASIC15.98■□□□□ 0.15
RAE1P78406 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAE1P78406 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.98■□□□□ 0.15
RAE1P78406 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.98■□□□□ 0.15
RAE1P78406 OR7E47P-204ENST00000575924 449 ntBASIC15.98■□□□□ 0.15
RAE1P78406 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAE1P78406 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
RAE1P78406 CYP2A7P1-201ENST00000595391 815 ntBASIC15.98■□□□□ 0.15
RAE1P78406 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAE1P78406 AC104692.2-201ENST00000603054 253 ntBASIC15.98■□□□□ 0.15
RAE1P78406 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.98■□□□□ 0.15
RAE1P78406 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAE1P78406 AL031008.1-201ENST00000619963 541 ntBASIC15.98■□□□□ 0.15
RAE1P78406 GGT4P-201ENST00000623672 1708 ntBASIC15.98■□□□□ 0.15
RAE1P78406 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.98■□□□□ 0.15
RAE1P78406 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAE1P78406 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RAE1P78406 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAE1P78406 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAE1P78406 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
RAE1P78406 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAE1P78406 AL031731.1-201ENST00000642131 2094 ntBASIC15.98■□□□□ 0.15
RAE1P78406 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.98■□□□□ 0.15
RAE1P78406 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAE1P78406 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAE1P78406 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.97■□□□□ 0.15
RAE1P78406 AL353732.1-201ENST00000569618 1459 ntBASIC15.97■□□□□ 0.15
RAE1P78406 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 AC026691.1-201ENST00000602502 2017 ntBASIC15.97■□□□□ 0.15
RAE1P78406 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 AL391005.1-201ENST00000623953 2435 ntBASIC15.97■□□□□ 0.15
RAE1P78406 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.97■□□□□ 0.15
RAE1P78406 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
RAE1P78406 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.97■□□□□ 0.15
RAE1P78406 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.97■□□□□ 0.15
RAE1P78406 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.97■□□□□ 0.15
RAE1P78406 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.97■□□□□ 0.15
RAE1P78406 FAM215A-202ENST00000632077 792 ntBASIC15.97■□□□□ 0.15
RAE1P78406 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.97■□□□□ 0.15
RAE1P78406 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.97■□□□□ 0.15
RAE1P78406 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.97■□□□□ 0.15
RAE1P78406 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAE1P78406 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAE1P78406 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 AC129492.6-201ENST00000611383 1305 ntBASIC15.96■□□□□ 0.15
RAE1P78406 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
RAE1P78406 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.96■□□□□ 0.15
RAE1P78406 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.96■□□□□ 0.15
RAE1P78406 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.96■□□□□ 0.15
RAE1P78406 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.96■□□□□ 0.15
RAE1P78406 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.96■□□□□ 0.15
RAE1P78406 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.96■□□□□ 0.15
RAE1P78406 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.96■□□□□ 0.15
RAE1P78406 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.96■□□□□ 0.15
RAE1P78406 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.96■□□□□ 0.15
RAE1P78406 AL049840.3-201ENST00000602669 611 ntBASIC15.96■□□□□ 0.15
RAE1P78406 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.96■□□□□ 0.15
RAE1P78406 MIR1199-201ENST00000621445 119 ntBASIC15.96■□□□□ 0.15
RAE1P78406 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.96■□□□□ 0.15
RAE1P78406 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms