Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 FRMD8P1-201ENST00000440433 1524 ntBASIC19.21■□□□□ 0.67
COPB2P35606 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 AC016027.1-202ENST00000607927 1699 ntBASIC19.21■□□□□ 0.67
COPB2P35606 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COPB2P35606 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.21■□□□□ 0.67
COPB2P35606 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.21■□□□□ 0.67
COPB2P35606 AC008677.1-201ENST00000519230 1561 ntBASIC19.21■□□□□ 0.67
COPB2P35606 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.21■□□□□ 0.67
COPB2P35606 AC138761.1-201ENST00000584393 385 ntBASIC19.21■□□□□ 0.67
COPB2P35606 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.21■□□□□ 0.67
COPB2P35606 CYP2A7P1-201ENST00000595391 815 ntBASIC19.21■□□□□ 0.67
COPB2P35606 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.21■□□□□ 0.67
COPB2P35606 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.21■□□□□ 0.67
COPB2P35606 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.21■□□□□ 0.67
COPB2P35606 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.21■□□□□ 0.67
COPB2P35606 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.21■□□□□ 0.67
COPB2P35606 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.21■□□□□ 0.67
COPB2P35606 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPB2P35606 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COPB2P35606 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.2■□□□□ 0.66
COPB2P35606 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 AC069120.2-201ENST00000524091 540 ntBASIC19.2■□□□□ 0.66
COPB2P35606 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.2■□□□□ 0.66
COPB2P35606 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.2■□□□□ 0.66
COPB2P35606 MIR4492-201ENST00000581627 80 ntBASIC19.2■□□□□ 0.66
COPB2P35606 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.2■□□□□ 0.66
COPB2P35606 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.2■□□□□ 0.66
COPB2P35606 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPB2P35606 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.2■□□□□ 0.66
COPB2P35606 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.2■□□□□ 0.66
COPB2P35606 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPB2P35606 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPB2P35606 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.19■□□□□ 0.66
COPB2P35606 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.19■□□□□ 0.66
COPB2P35606 HTR7P1-202ENST00000624664 4411 ntBASIC19.19■□□□□ 0.66
COPB2P35606 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COPB2P35606 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPB2P35606 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COPB2P35606 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.19■□□□□ 0.66
COPB2P35606 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.19■□□□□ 0.66
COPB2P35606 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.19■□□□□ 0.66
COPB2P35606 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.19■□□□□ 0.66
COPB2P35606 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COPB2P35606 KRT18P34-201ENST00000488218 1270 ntBASIC19.19■□□□□ 0.66
COPB2P35606 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.19■□□□□ 0.66
COPB2P35606 AC105233.2-201ENST00000523697 349 ntBASIC19.19■□□□□ 0.66
COPB2P35606 AF228730.5-201ENST00000530288 346 ntBASIC19.19■□□□□ 0.66
COPB2P35606 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPB2P35606 AC190387.1-201ENST00000551683 408 ntBASIC19.19■□□□□ 0.66
COPB2P35606 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.19■□□□□ 0.66
COPB2P35606 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.19■□□□□ 0.66
COPB2P35606 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.19■□□□□ 0.66
COPB2P35606 GNAS-203ENST00000306120 1878 ntBASIC19.19■□□□□ 0.66
COPB2P35606 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPB2P35606 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.19■□□□□ 0.66
COPB2P35606 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.19■□□□□ 0.66
COPB2P35606 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.19■□□□□ 0.66
COPB2P35606 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPB2P35606 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COPB2P35606 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
COPB2P35606 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
COPB2P35606 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.18■□□□□ 0.66
COPB2P35606 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COPB2P35606 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COPB2P35606 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.18■□□□□ 0.66
COPB2P35606 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.18■□□□□ 0.66
COPB2P35606 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.18■□□□□ 0.66
COPB2P35606 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.18■□□□□ 0.66
COPB2P35606 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.18■□□□□ 0.66
COPB2P35606 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.18■□□□□ 0.66
COPB2P35606 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms